Feature updates and improvements
Compute environments
Grouped compute environment selects by platform, listed the workspace primary environment first, and added an in-panel search that matches on name, region, and platform.
Changed the pre-selected compute environment in launch forms from the alphabetically first environment to the workspace primary environment.
General
Removed the count badges from the Runs , Reports , Datasets , and Projects tabs.
Bug fixes
Credentials
Fixed the Password field helper text on the GitLab and Gitea credential forms to state that a personal access token must be entered in both the Access token and Password fields, and that the Password field is required for Nextflow versions before 26.04.
Pipelines
Fixed the launch form to preserve the output directory when resuming a run, instead of publishing to the pipeline default.
Fixed user-typed launch parameters being discarded when a config profile or revision change re-fetched the parameters.
Fixed schema default parameters being dropped from the submitted parameters after selecting a config profile.
Fixed nested parameter groups being submitted as null, which disabled Launch with no way to clear the error.
Feature updates and improvements
Studios
Added filtering to the Studios list, with the selected filters persisted across navigation.
Compute environments
Added an OS disk size setting to Azure Cloud compute environments.
Added an optional Region field to the Azure credential forms, with autocomplete suggestions and free-text entry for regions outside the catalog.
Pipelines
Added support for Nextflow v26.08.0-edge.
Improved launch performance by reducing the number of SCM calls made on the launch path.
Data Explorer
Added search to the data link selector in the bucket action form.
Added an optional creationSource query parameter to the data links list endpoint, so clients can request only user-created or only cloud-discovered links.
Added the ability to regenerate presigned upload URLs for an in-progress AWS upload through the existing Data Explorer upload endpoint.
Co-Scientist
Added a usage display to the chat panel.
Docked the chat panel beside the page content instead of overlaying it.
Improved the conversation history list and chat input responsiveness.
Bug fixes
Compute environments
Fixed false "region not found" warnings on Azure credentials by probing Azure Batch in the credential's own region instead of westeurope, and by validating Batch access on the compute environment rather than the credential.
Fixed compute environment deletion being possible while creation was still in progress.
Fixed the compute environment details page to redirect to the compute environment list after a deletion.
Fixed forged Azure Cloud compute environments losing their Nextflow configuration.
Fixed runs being flagged for attention when a UserData script failed.
Credentials
Fixed credential validation to back off and escalate probes that fail permanently, instead of retrying them at the same rate.
Monitoring and observability
Fixed the runs toolbar disappearing in loading and empty states.
Credits
Fixed the credits report download to show progress and offer a cancel control.
Fixed GA4GH WES to return 404 instead of 500 for an unknown run ID on run describe, status, and cancel.
Fixed the OpenAPI reference to declare optional response properties as nullable, so conforming validators and generated clients no longer reject valid responses.
General
Fixed the default workspace preference not being cleared correctly.
Feature updates and improvements
Compute environments
Added an optional KMS key ARN to AWS Batch compute environments, so pipeline secrets in AWS Secrets Manager can be encrypted with a customer-managed key instead of the AWS-managed default.
Access control
Updated the copy and API URL chip on the Access tokens page.
General
Added the page number and search terms to paginated list URLs, so list state survives back-navigation and list URLs are shareable.
Bug fixes
Compute environments
Fixed AWS Cloud head job failures returning an empty log page when the compute environment's IAM instance profile has no role attached.
Fixed compute environment create and update accepting credentials already recorded as invalid or soft-deleted, and update resetting a credential's status without checking it.
Fixed exhausted Google Cloud IAM retries to report a meaningful error, and added jitter to the retry backoff.
Data Explorer
Fixed tab flicker and a full-width action button in the file browser.
Fixed IGV reference genome URLs not being signed, and corrected IGV rendering.
Fixed an error when listing data in workspaces with auto-discovery disabled.
Monitoring and observability
Fixed the Runs tab pagination being scoped incorrectly on the project details page.
Removed the ambiguous "last run" chips from the project header.
Feature updates and improvements
Compute environments
Added a maxCpusPerUser setting to cap per-user vCPU usage in compute environments.
Standardized head node instance type helper text across AWS, Azure, and Google Cloud compute environment forms.
Pipelines
Added support for Nextflow v25.10.6 and v25.10.7.
General
Removed the redundant Projects section from the workspace side navigation.
Bug fixes
Studios
Fixed Studios row card horizontal scrolling when the sidebar is expanded on small screens.
Compute environments
Fixed GCP pipeline secrets to be pinned to the compute environment region.
Fixed GCP IAM policy write conflicts during Forge compute environment creation.
Pipelines
Fixed shared pipeline resolution by passing the source workspace ID.
Datasets
Fixed dataset queries to exclude deleted runs.
Labels
Fixed generic label editing to no longer drop project labels.
Co-Scientist
Fixed the Co-Scientist portal web session link.
Feature updates and improvements
Compute environments
Added support for private Azure Container Registry (ACR) image pulls on Azure Cloud.
Studios
Added the ability to display logs for the latest Studio run.
Added support for applying custom CA configuration to Studios.
Co-Scientist
Added the ability to select Co-Scientist conversation history.
Added page context and screenshot sharing to Co-Scientist chat.
Projects
Refined project details workflows.
Credits
Added audit log events for the self-serve credit purchase lifecycle.
Added a root endpoint to cancel purchases stuck in the PENDING state.
General
Aligned the key-value date search filter hint with its control.
Bug fixes
Compute environments
Fixed duplicated AWS Batch compute environments carrying a stale ec2KeyPair value by reconciling select values against loaded options.
Prevented orphaned agent session-expiration tasks from flooding the scheduled task pool.
Studios
Fixed flickering of Studio environment variables.
Seqera AI
Surfaced the server error reason in Co-Scientist chat.
Security
Redacted tokens and secrets from application logs.
General
Fixed dark-theme issues from the semantic color token migration.
Feature updates and improvements
Studios
Added the ability to mark Studios as favorites, persisted per user.
Added the ability to cancel Studios stuck in the stopping state.
Pipelines
Added a pipeline version ID column to the pipeline versions list.
Data Explorer
Added object last-modified timestamps in Data Explorer.
General
Aligned global search with the lineage query DSL.
Bug fixes
Pipelines
Fixed pipeline version updates to baseline against the original compute environment.
Fixed the optimization banner not showing when relaunching a run from a shared pipeline.
Fixed Nextflow version selection so a version can be chosen when the source launch pinned none.
Feature updates and improvements
Studios
Added the Studios allowed-user table and data model.
Implemented DataStudioAllowedUserService to persist allowed users on Studio create and start.
Authorized allow-listed users to connect to and run private Studios.
Exposed the allowlist in the Studios API response.
Added revalidation of the last checkpoint in Studios.
Compute environments
Added a Nextflow version selector, including feature-based version requirements and its specification.
Disabled Nextflow version selection when a custom launcher container is pinned.
Added persistence of the AWS Cloud log group and forwarding to the CloudWatch agent.
Added clickable row cards with new hover tokens.
Added root-only admin validate endpoints.
Pipelines
Added a toggle for the Nextflow syntax parser v2.
Access control
Added the foundation for OAuth 2.0 refresh-token rotation.
Added an organization allowlist to the IdP claims-mapping feature flag.
Added audit image support for team IdP groups.
Added audit logs for SCIM tokens.
Monitoring and observability
Added a current-month CPU hours metric.
General
Enhanced the global search UI with infinite scroll and suggestions.
Bug fixes
Compute environments
Surfaced actionable GCP Batch API errors instead of a misleading WIF hint.
Set GOOGLE_CLOUD_PROJECT on the GCP Batch head job for xpack-google secret resolution.
Fixed selecting a Nextflow version when the source pinned none.
Added retries for AWS forge calls under IAM throttling.
Fixed a deadlock on last_used updates.
Avoided a full table rebuild in the m158 cost-retrieval migration.
Added INSTANT-safe overrides for algorithm-pinned migrations.
Removed a redundant compute environment work-directory pre-flight check.
Restored inner target="_blank" links under wtSmartNav.
Data explorer
Fixed stale REFRESH_IN_PROGRESS states by timing them out so Data explorer self-heals.
Access control
Fixed disabled personal workspaces remaining accessible through their URL.
Fixed the IdP reconciler to create UserRole entries for workspace visibility.
Corrected the managed credentials path parameter.
Feature updates and improvements
Studios
Added NVIDIA environment variables for GPU Studios.
Compute environments
Added bring-your-own networking support for Azure Cloud compute environments.
Pipelines
Added pipeline secrets support for scheduler-backed Cloud compute environments, covering both storage and the launch form.
Disabled Nextflow version selection when a custom launcher container is pinned.
Updated Nextflow launcher to v26.04.6.
Security
Redacted full user email addresses from logs.
Bug fixes
Compute environments
Added retries for AWS Forge calls under IAM throttling.
Fixed xpack-google secret resolution by setting GOOGLE_CLOUD_PROJECT on the GCP Batch head job.
Fixed work directory validation for legacy Seqera Compute configurations.
Surfaced actionable GCP Batch API errors instead of the misleading Workload Identity Federation hint.
Feature updates and improvements
Compute environments
Added the compute environment ID to the compute environment row card.
Added the c9gd instance family to the NVMe instance list.
Updated the list of available Azure regions.
Bug fixes
Compute environments
Added a clear error message when Azure Batch pool deletion fails.
Disabled compute environment form submission while the form is invalid.
Data explorer
Signed GCS genomic file URLs with V4 for IGV preview.
Feature updates and improvements
Compute environments
Added VPC and multiple subnet selection to AWS Cloud compute environments.
Added the number of instances provisioned per run to the run page, sourced from the Scheduler run summary.
Added the g7 instance family to the NVMe list.
Required Spot provisioning for Fusion snapshots and aligned the GCP provisioning interface.
Refined the compute environment list with a type label, Cloud feature hiding, and an Invalid status.
Pipelines
Updated Nextflow to v26.04.4.
Access control
Split the data_link and data_link_object permissions into separate scopes. Workspace members with View , Connect , or Launch roles can now download files and generate download URLs from data-links. Upload and delete file operations remain restricted to Maintain and above.
Added pre-filling of first and last name from GitHub signup.
Added a groups scope to SSO connections.
Added handling for malformed groups claims.
Rejected group creation with commas when Auth0 is enabled.
Monitoring and observability
Added audit entries for pre-flight cron status transitions.
General
Added a default workspace preference to the user profile.
Listed avatar and username rows in the avatar-group popover.
Bug fixes
Pipelines
Fixed lineage incorrectly showing as not enabled for submitted runs when it was enabled.
Access control
Fixed detection of a personal access token as a duplicate when creating a GitHub App with the same credentials.
General
Fixed uploaded avatars not persisting when an admin creates a user.
Fixed unknown workspace sub-routes to redirect to the workspace root.
Fixed the favicon to follow the OS light and dark color scheme.
Fixed several UI issues across the run page, Data Explorer, and search.